@prefix dce: <http://purl.org/dc/elements/1.1/>.
@prefix owl: <http://www.w3.org/2002/07/owl#>.
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#>.
@prefix xsd: <http://www.w3.org/2001/XMLSchema#>.
@prefix skos: <http://www.w3.org/2004/02/skos/core#>.
@prefix fos: <http://eulersharp.sourceforge.net/2003/03swap/foster#>.
@prefix event: <http://eulersharp.sourceforge.net/2003/03swap/event#>.
@prefix agent: <http://eulersharp.sourceforge.net/2003/03swap/agent#>.
@prefix clinproc: <http://www.agfa.com/w3c/2009/clinicalProcedure#>.
@prefix clisko: <http://www.agfa.com/w3c/2009/clinicalSKOSSchemes#>.
@prefix quant: <http://eulersharp.sourceforge.net/2003/03swap/quantities#>.
@prefix units: <http://eulersharp.sourceforge.net/2003/03swap/units#>.
@prefix organism: <http://eulersharp.sourceforge.net/2003/03swap/organism#>.
@prefix human: <http://eulersharp.sourceforge.net/2003/03swap/human#>.
@prefix humana: <http://www.agfa.com/w3c/2009/anatomy#>.
@prefix heca: <http://www.agfa.com/w3c/2009/healthCare#>.
@prefix env: <http://eulersharp.sourceforge.net/2003/03swap/environment#>.
@prefix clinspec: <http://www.agfa.com/w3c/2009/clinicalSpecimen#>.
@prefix clinlabproc: <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>.
<http://www.agfa.com/w3c/2009/clinicalLabProcedure>
a owl:Ontology;
dce:title """Clinical Lab Procedure"""@en;
dce:creator """Hans Cools, MD; Agfa Healthcare/Belgium"""@en;
dce:contributor """Until 2010: Pieterjan De Potter; Ghent University - IBBT/ELIS - Multimedia Lab/Belgium"""@en;
dce:publisher """Agfa Healthcare/Belgium"""@en;
dce:description """Formal general description of clinical lab procedure."""@en;
dce:format """OWL Full"""@en;
rdfs:comment """Copyright (c) 2009 Agfa-Gevaert Group and Ghent University - IBBT/ELIS - Multimedia Lab. All Rights Reserved. THIS IS UNPUBLISHED PROPRIETARY SOURCE CODE OF Agfa-Gevaert Group and Ghent University - IBBT/ELIS - Multimedia Lab The copyright notice above does not evidence any actual or intended publication of such source code."""@en.
clinlabproc:Procedure
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """clinical laboratory procedure"""@en;
skos:definition """Laboratory procedure of any kind concerning a human patient."""@en;
rdfs:subClassOf clinproc:Procedure, [
a owl:Restriction; owl:onProperty event:performedIn; owl:someValuesFrom heca:Laboratory];
skos:exactMatch [
a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "108252007"^^clisko:sct20080731DT].
clinlabproc:Examining
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """clinical laboratory examining"""@en;
skos:definition """Examining a patient through laboratory tests."""@en;
rdfs:subClassOf clinproc:Examining, clinlabproc:Procedure, [
a owl:Restriction; owl:onProperty event:hasOutput; owl:someValuesFrom clinlabproc:Examination];
skos:exactMatch [
a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "15220000"^^clisko:sct20080731DT].
clinlabproc:Examination
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """clinical laboratory examination"""@en;
skos:definition """Output of clinical laboratory examining."""@en;
rdfs:subClassOf clinproc:Examination, [
a owl:Restriction; owl:onProperty event:outputOf; owl:someValuesFrom clinlabproc:Examining].
clinlabproc:BloodExamining
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """clinical blood examining"""@en;
skos:definition """Laboratory examining of a patient's blood."""@en;
rdfs:subClassOf clinlabproc:Examining
.
clinlabproc:BloodExamination
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """clinical blood examination"""@en;
skos:definition """Laboratory examination of a patient's blood."""@en;
rdfs:subClassOf clinlabproc:Examination.
clinlabproc:Serotyping
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """clinical serotyping"""@en;
skos:definition """Establishing a clinical serotype."""@en;
rdfs:subClassOf clinlabproc:Examining.
clinlabproc:Serotype
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """clinical serotype"""@en;
skos:definition """Having a characteristic set of antigens on a cell surface, as output of a clinical lab test."""@en;
skos:exactMatch [
a skos:Concept; skos:inScheme clisko:sct20080731; skos:notation "260820006"^^clisko:sct20080731DT].
clinlabproc:LDHConcentration
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """lactate dehydrogenase concentration"""@en;
skos:definition """Amount of lactate dehydrogenase (LDH) per human blood volume."""@en;
rdfs:subClassOf quant:Concentration.
clinlabproc:GOTConcentration
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """glutamic oxaloacetic transaminase concentration"""@en;
skos:definition """Amount of glutamic oxaloacetic transaminase (GOT) per human blood volume."""@en;
rdfs:subClassOf quant:Concentration.
clinlabproc:Karyotyping
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """clinical karyotyping"""@en;
skos:definition """Karyotyping of a human patient."""@en;
rdfs:subClassOf organism:Karyotyping, clinlabproc:Examining, [
a owl:Restriction; owl:onProperty event:hasOutput; owl:someValuesFrom clinlabproc:Karyotype].
clinlabproc:Karyotype
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """clinical karyotype"""@en;
skos:definition """Karyotype of a human patient."""@en;
rdfs:subClassOf organism:Karyotype, clinlabproc:Examination, [
a owl:Restriction; owl:onProperty event:outputOf; owl:someValuesFrom clinlabproc:Karyotyping].
clinlabproc:ZAP70Expression
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """zeta-chain-associated protein kinase 70 expression"""@en;
skos:definition """."""@en;
rdfs:subClassOf quant:PhysicalQuantity.
clinlabproc:ZAP70Measurement
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """zeta-chain-associated protein kinase 70 measurement"""@en;
skos:definition """."""@en;
rdfs:subClassOf clinlabproc:Examination, [
a owl:Restriction; owl:onProperty quant:measurementOf; owl:someValuesFrom clinlabproc:ZAP70Expression].
clinlabproc:CD38Expression
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """cluster of differentiation 38 expression"""@en;
skos:definition """."""@en;
rdfs:subClassOf quant:PhysicalQuantity.
clinlabproc:CD38Measurement
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """cluster of differentiation 38 measurement"""@en;
skos:definition """."""@en;
rdfs:subClassOf clinlabproc:Examination, [
a owl:Restriction; owl:onProperty quant:measurementOf; owl:someValuesFrom clinlabproc:CD38Expression].
clinlabproc:ThymidineKinaseSerumConcentration
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """thymidine kinase serum concentration"""@en;
skos:definition """."""@en;
rdfs:subClassOf quant:Concentration.
clinlabproc:ThymidineKinaseSerumConcentrationMeasurement
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """thymidine kinase serum concentration measurement"""@en;
skos:definition """."""@en;
rdfs:subClassOf clinlabproc:BloodExamination, [
a owl:Restriction; owl:onProperty quant:measurementOf; owl:someValuesFrom clinlabproc:ThymidineKinaseSerumConcentration], [
a owl:Restriction; owl:onProperty quant:hasUnit; owl:someValuesFrom units:unitsPerLiter].
clinlabproc:B2MicroglobulinSerumConcentration
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """B2 microglobulin serum concentration"""@en;
skos:definition """."""@en;
rdfs:subClassOf quant:Concentration.
clinlabproc:B2MicroglobulinSerumConcentrationMeasurement
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """B2 microglobulin serum concentration measurement"""@en;
skos:definition """."""@en;
rdfs:subClassOf clinlabproc:BloodExamination, [
a owl:Restriction; owl:onProperty quant:measurementOf; owl:someValuesFrom clinlabproc:B2MicroglobulinSerumConcentration], [
a owl:Restriction; owl:onProperty quant:hasUnit; owl:someValuesFrom units:milligramPerLiter].
clinlabproc:LymphocyteDoublingTime
a rdfs:Class;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """lymphocyte doubling time"""@en;
skos:definition """Action of doubling of a lymphocyte count."""@en;
rdfs:subClassOf event:Action.
clinlabproc:examinationOf
a owl:ObjectProperty;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """clinical lab examination of"""@en;
skos:definition """Specifying a patient's specimen having a clinical lab examination."""@en;
rdfs:subPropertyOf event:examinationOf;
rdfs:domain clinlabproc:Examination;
rdfs:range clinspec:Specimen.
clinlabproc:gotExaminedIn
a owl:ObjectProperty;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
rdfs:label """got examined in a clinical lab examining"""@en;
skos:definition """Specifying a clinical lab examining a patient got a specimen examined in."""@en;
rdfs:domain [a owl:Restriction; owl:onProperty agent:playsRole; owl:someValuesFrom heca:Patient];
rdfs:range clinlabproc:Examining.
clinlabproc:hasSpecimen
a owl:ObjectProperty;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
skos:definition """Specifying a specimen being clinically examined."""@en;
rdfs:comment """Specimen considered as agent in a clinical examining procedure."""@en;
rdfs:subPropertyOf agent:hasAgent;
rdfs:domain clinlabproc:Examining;
rdfs:range clinspec:Specimen.
clinlabproc:hasLymphocyteDoublingDuration
a owl:FunctionalProperty;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
skos:definition """Specifying a duration of doubling of a lymphocyte count."""@en;
rdfs:domain [a owl:Restriction; owl:onProperty agent:playsRole; owl:someValuesFrom heca:Patient];
rdfs:range rdfs:Literal;
rdfs:comment """range: untyped numeral representing number of seconds"""@en.
clinlabproc:hasLymphocyteDoublingMonthDuration
a owl:FunctionalProperty;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
skos:definition """Specifying a duration in months of doubling of a lymphocyte count."""@en;
rdfs:domain [a owl:Restriction; owl:onProperty agent:playsRole; owl:someValuesFrom heca:Patient];
rdfs:range rdfs:Literal;
rdfs:comment """range: untyped numeral representing number of months"""@en.
clinlabproc:hasShortLymphocyteDoublingMonthDuration
a owl:FunctionalProperty;
rdfs:isDefinedBy <http://www.agfa.com/w3c/2009/clinicalLabProcedure#>;
skos:definition """Specifying a duration in months of doubling of a lymphocyte count in less than 12 months."""@en;
rdfs:domain [a owl:Restriction; owl:onProperty agent:playsRole; owl:someValuesFrom heca:Patient];
rdfs:range rdfs:Literal;
rdfs:comment """range: untyped numeral representing number of months"""@en.